Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RPL13AP25-201ENST00000484130 612 ntBASIC14.39□□□□□ -0.11
KRT20P35900 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.39□□□□□ -0.11
KRT20P35900 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.39□□□□□ -0.11
KRT20P35900 AC023310.3-201ENST00000557027 670 ntBASIC14.39□□□□□ -0.11
KRT20P35900 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.39□□□□□ -0.11
KRT20P35900 AC100756.1-201ENST00000562736 682 ntBASIC14.39□□□□□ -0.11
KRT20P35900 RRP7BP-205ENST00000566851 833 ntBASIC14.39□□□□□ -0.11
KRT20P35900 AC138749.3-201ENST00000567691 622 ntBASIC14.39□□□□□ -0.11
KRT20P35900 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.39□□□□□ -0.11
KRT20P35900 AL132655.2-201ENST00000596276 594 ntBASIC14.39□□□□□ -0.11
KRT20P35900 AC116165.1-201ENST00000611806 668 ntBASIC14.39□□□□□ -0.11
KRT20P35900 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KRT20P35900 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.39□□□□□ -0.11
KRT20P35900 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.39□□□□□ -0.11
KRT20P35900 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
KRT20P35900 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
KRT20P35900 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.39□□□□□ -0.11
KRT20P35900 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.39□□□□□ -0.11
KRT20P35900 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
KRT20P35900 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
KRT20P35900 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT20P35900 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT20P35900 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KRT20P35900 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT20P35900 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
KRT20P35900 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 AL137784.3-201ENST00000623858 2288 ntBASIC14.38□□□□□ -0.11
KRT20P35900 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT20P35900 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 AC002472.2-201ENST00000442739 958 ntBASIC14.38□□□□□ -0.11
KRT20P35900 SPTLC1P1-201ENST00000447199 261 ntBASIC14.38□□□□□ -0.11
KRT20P35900 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.38□□□□□ -0.11
KRT20P35900 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KRT20P35900 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.38□□□□□ -0.11
KRT20P35900 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.38□□□□□ -0.11
KRT20P35900 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.38□□□□□ -0.11
KRT20P35900 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT20P35900 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT20P35900 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.38□□□□□ -0.11
KRT20P35900 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KRT20P35900 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT20P35900 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT20P35900 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
KRT20P35900 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT20P35900 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT20P35900 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT20P35900 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
KRT20P35900 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT20P35900 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
KRT20P35900 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT20P35900 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT20P35900 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT20P35900 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KRT20P35900 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT20P35900 RN7SL204P-201ENST00000582831 262 ntBASIC14.37□□□□□ -0.11
KRT20P35900 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
KRT20P35900 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms