Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT9P35527 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT9P35527 TPT1P11-201ENST00000458482 498 ntBASIC16.5■□□□□ 0.23
KRT9P35527 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 AC004066.1-201ENST00000502488 802 ntBASIC16.5■□□□□ 0.23
KRT9P35527 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.5■□□□□ 0.23
KRT9P35527 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT9P35527 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT9P35527 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT9P35527 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT9P35527 AC104794.3-201ENST00000566840 1248 ntBASIC16.5■□□□□ 0.23
KRT9P35527 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
KRT9P35527 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT9P35527 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 AL158212.4-201ENST00000624062 1286 ntBASIC16.5■□□□□ 0.23
KRT9P35527 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT9P35527 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
KRT9P35527 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 BEND3P1-201ENST00000421591 1944 ntBASIC16.5■□□□□ 0.23
KRT9P35527 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT9P35527 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KRT9P35527 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT9P35527 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
KRT9P35527 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
KRT9P35527 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KRT9P35527 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.49■□□□□ 0.23
KRT9P35527 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.49■□□□□ 0.23
KRT9P35527 DOC2GP-202ENST00000514950 1163 ntBASIC16.49■□□□□ 0.23
KRT9P35527 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT9P35527 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT9P35527 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.49■□□□□ 0.23
KRT9P35527 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.49■□□□□ 0.23
KRT9P35527 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.49■□□□□ 0.23
KRT9P35527 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.49■□□□□ 0.23
KRT9P35527 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KRT9P35527 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT9P35527 AC018665.1-201ENST00000622927 1362 ntBASIC16.49■□□□□ 0.23
KRT9P35527 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KRT9P35527 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT9P35527 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT9P35527 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT9P35527 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.49■□□□□ 0.23
KRT9P35527 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT9P35527 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 AL354702.1-201ENST00000442006 1960 ntBASIC16.48■□□□□ 0.23
KRT9P35527 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT9P35527 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT9P35527 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 MIR770-201ENST00000390219 98 ntBASIC16.48■□□□□ 0.23
KRT9P35527 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT9P35527 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT9P35527 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT9P35527 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
KRT9P35527 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT9P35527 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.48■□□□□ 0.23
KRT9P35527 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT9P35527 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT9P35527 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KRT9P35527 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms