Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.41■□□□□ 0.38
ERCC3P19447 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ERCC3P19447 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC3P19447 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ERCC3P19447 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC3P19447 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC3P19447 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
ERCC3P19447 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.4■□□□□ 0.38
ERCC3P19447 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
ERCC3P19447 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 HLA-K-203ENST00000430151 1046 ntBASIC17.4■□□□□ 0.38
ERCC3P19447 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.4■□□□□ 0.38
ERCC3P19447 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 UPF3AP2-201ENST00000457924 1132 ntBASIC17.4■□□□□ 0.38
ERCC3P19447 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC3P19447 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ERCC3P19447 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC3P19447 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.4■□□□□ 0.38
ERCC3P19447 MIR3619-201ENST00000579667 83 ntBASIC17.4■□□□□ 0.38
ERCC3P19447 AC138466.3-201ENST00000619983 221 ntBASIC17.4■□□□□ 0.38
ERCC3P19447 AC138627.1-207ENST00000641560 1006 ntBASIC17.4■□□□□ 0.38
ERCC3P19447 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 AC138035.3-201ENST00000622706 2791 ntBASIC17.4■□□□□ 0.38
ERCC3P19447 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ERCC3P19447 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ERCC3P19447 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.4■□□□□ 0.38
ERCC3P19447 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC3P19447 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ERCC3P19447 AC067930.6-201ENST00000623257 4947 ntBASIC17.4■□□□□ 0.38
ERCC3P19447 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ERCC3P19447 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
ERCC3P19447 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC3P19447 REXO1L5P-201ENST00000622260 2098 ntBASIC17.4■□□□□ 0.38
ERCC3P19447 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC3P19447 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC3P19447 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC3P19447 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.39■□□□□ 0.38
ERCC3P19447 AC087481.3-201ENST00000602886 1894 ntBASIC17.39■□□□□ 0.38
ERCC3P19447 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC3P19447 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC3P19447 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
ERCC3P19447 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ERCC3P19447 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.39■□□□□ 0.37
ERCC3P19447 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.39■□□□□ 0.37
ERCC3P19447 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 CYP46A4P-201ENST00000414953 267 ntBASIC17.39■□□□□ 0.37
ERCC3P19447 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ERCC3P19447 CHMP4BP1-201ENST00000556017 588 ntBASIC17.39■□□□□ 0.37
ERCC3P19447 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.39■□□□□ 0.37
ERCC3P19447 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC3P19447 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ERCC3P19447 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.39■□□□□ 0.37
ERCC3P19447 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC3P19447 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ERCC3P19447 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms