Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CDH1P12830 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH1P12830 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CDH1P12830 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CDH1P12830 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH1P12830 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH1P12830 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH1P12830 RN7SL692P-201ENST00000464677 288 ntBASIC14.7□□□□□ -0.06
CDH1P12830 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.7□□□□□ -0.06
CDH1P12830 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.7□□□□□ -0.06
CDH1P12830 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH1P12830 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH1P12830 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH1P12830 CLUHP6-201ENST00000580789 941 ntBASIC14.7□□□□□ -0.06
CDH1P12830 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH1P12830 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.7□□□□□ -0.06
CDH1P12830 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH1P12830 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDH1P12830 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH1P12830 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
CDH1P12830 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH1P12830 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDH1P12830 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 AC098614.1-201ENST00000368528 745 ntBASIC14.69□□□□□ -0.06
CDH1P12830 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH1P12830 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH1P12830 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDH1P12830 RN7SL752P-201ENST00000463779 287 ntBASIC14.69□□□□□ -0.06
CDH1P12830 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH1P12830 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH1P12830 AP001063.1-201ENST00000568332 529 ntBASIC14.69□□□□□ -0.06
CDH1P12830 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH1P12830 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CDH1P12830 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.69□□□□□ -0.06
CDH1P12830 PRSS30P-206ENST00000641773 873 ntBASIC14.69□□□□□ -0.06
CDH1P12830 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDH1P12830 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.69□□□□□ -0.06
CDH1P12830 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDH1P12830 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CDH1P12830 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH1P12830 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDH1P12830 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms