Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 KRT18P28-201ENST00000453838 1332 ntBASIC13.59□□□□□ -0.23
HLA-DQA2P01906 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.59□□□□□ -0.23
HLA-DQA2P01906 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 AC007191.1-201ENST00000623179 2995 ntBASIC13.59□□□□□ -0.23
HLA-DQA2P01906 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DQA2P01906 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
HLA-DQA2P01906 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 AL512638.1-201ENST00000457493 794 ntBASIC13.58□□□□□ -0.24
HLA-DQA2P01906 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 ZNF890P-202ENST00000530367 1156 ntBASIC13.58□□□□□ -0.24
HLA-DQA2P01906 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 DUX4L27-201ENST00000554796 1261 ntBASIC13.58□□□□□ -0.24
HLA-DQA2P01906 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 AC000095.1-201ENST00000603208 874 ntBASIC13.58□□□□□ -0.24
HLA-DQA2P01906 AC023511.2-201ENST00000618803 211 ntBASIC13.58□□□□□ -0.24
HLA-DQA2P01906 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 LILRP1-201ENST00000444199 1370 ntBASIC13.58□□□□□ -0.24
HLA-DQA2P01906 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DQA2P01906 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms