Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DRAP01903 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 PKD1P5-201ENST00000532415 10291 ntBASIC16.13■□□□□ 0.17
HLA-DRAP01903 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 ARSEP1-201ENST00000420443 635 ntBASIC16.13■□□□□ 0.17
HLA-DRAP01903 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 AC020910.5-201ENST00000623668 1865 ntBASIC16.13■□□□□ 0.17
HLA-DRAP01903 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 INTS4P1-203ENST00000641008 3683 ntBASIC16.13■□□□□ 0.17
HLA-DRAP01903 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DRAP01903 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DRAP01903 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 AC232323.1-201ENST00000540724 2099 ntBASIC16.12■□□□□ 0.17
HLA-DRAP01903 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 AC140479.7-201ENST00000636301 2332 ntBASIC16.12■□□□□ 0.17
HLA-DRAP01903 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 RPL7P3-201ENST00000441388 714 ntBASIC16.12■□□□□ 0.17
HLA-DRAP01903 AC234783.1-201ENST00000441761 496 ntBASIC16.12■□□□□ 0.17
HLA-DRAP01903 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 AP003171.2-201ENST00000528208 925 ntBASIC16.12■□□□□ 0.17
HLA-DRAP01903 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 AC106820.3-201ENST00000561653 397 ntBASIC16.12■□□□□ 0.17
HLA-DRAP01903 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 AC006453.4-201ENST00000636949 1252 ntBASIC16.12■□□□□ 0.17
HLA-DRAP01903 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.12■□□□□ 0.17
HLA-DRAP01903 AL161772.1-201ENST00000610494 4412 ntBASIC16.12■□□□□ 0.17
HLA-DRAP01903 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DRAP01903 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DRAP01903 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms