Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.73□□□□□ -0.37
PDCD6O75340 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.73□□□□□ -0.37
PDCD6O75340 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
PDCD6O75340 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 MIR1233-2-201ENST00000408138 82 ntBASIC12.73□□□□□ -0.37
PDCD6O75340 MIR1233-1-201ENST00000408722 82 ntBASIC12.73□□□□□ -0.37
PDCD6O75340 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 AL589987.1-201ENST00000453380 819 ntBASIC12.73□□□□□ -0.37
PDCD6O75340 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 RPL13AP25-201ENST00000484130 612 ntBASIC12.73□□□□□ -0.37
PDCD6O75340 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 AC135586.1-201ENST00000539323 574 ntBASIC12.73□□□□□ -0.37
PDCD6O75340 RARRES2P5-201ENST00000564013 466 ntBASIC12.73□□□□□ -0.37
PDCD6O75340 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 AC009407.1-201ENST00000568958 598 ntBASIC12.73□□□□□ -0.37
PDCD6O75340 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.73□□□□□ -0.37
PDCD6O75340 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
PDCD6O75340 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 AL928921.2-201ENST00000641325 2442 ntBASIC12.73□□□□□ -0.37
PDCD6O75340 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.73□□□□□ -0.37
PDCD6O75340 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PDCD6O75340 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
PDCD6O75340 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.72□□□□□ -0.37
PDCD6O75340 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PDCD6O75340 BEND3P1-201ENST00000421591 1944 ntBASIC12.72□□□□□ -0.37
PDCD6O75340 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
PDCD6O75340 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.72□□□□□ -0.37
PDCD6O75340 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
PDCD6O75340 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.72□□□□□ -0.37
PDCD6O75340 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.72□□□□□ -0.37
PDCD6O75340 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.72□□□□□ -0.37
PDCD6O75340 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.72□□□□□ -0.37
PDCD6O75340 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PDCD6O75340 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.72□□□□□ -0.37
PDCD6O75340 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.72□□□□□ -0.37
PDCD6O75340 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.72□□□□□ -0.37
PDCD6O75340 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.72□□□□□ -0.37
PDCD6O75340 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.72□□□□□ -0.37
PDCD6O75340 SPDYE18-201ENST00000510091 1050 ntBASIC12.72□□□□□ -0.37
PDCD6O75340 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.72□□□□□ -0.37
PDCD6O75340 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.72□□□□□ -0.37
PDCD6O75340 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.72□□□□□ -0.37
PDCD6O75340 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.72□□□□□ -0.37
PDCD6O75340 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.72□□□□□ -0.37
PDCD6O75340 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms