Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
SH2D1AO60880 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 AL590627.1-203ENST00000421194 1026 ntBASIC11.29□□□□□ -0.6
SH2D1AO60880 SERBP1P3-201ENST00000459980 809 ntBASIC11.29□□□□□ -0.6
SH2D1AO60880 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.29□□□□□ -0.6
SH2D1AO60880 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.29□□□□□ -0.6
SH2D1AO60880 AL079307.3-201ENST00000556114 283 ntBASIC11.29□□□□□ -0.6
SH2D1AO60880 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.29□□□□□ -0.6
SH2D1AO60880 AC025048.3-201ENST00000590609 569 ntBASIC11.29□□□□□ -0.6
SH2D1AO60880 AC005702.4-201ENST00000618393 416 ntBASIC11.29□□□□□ -0.6
SH2D1AO60880 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.29□□□□□ -0.6
SH2D1AO60880 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.29□□□□□ -0.6
SH2D1AO60880 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SH2D1AO60880 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SH2D1AO60880 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SH2D1AO60880 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.28□□□□□ -0.6
SH2D1AO60880 AC016397.2-201ENST00000624848 1985 ntBASIC11.28□□□□□ -0.6
SH2D1AO60880 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.28□□□□□ -0.6
SH2D1AO60880 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.28□□□□□ -0.6
SH2D1AO60880 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SH2D1AO60880 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SH2D1AO60880 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SH2D1AO60880 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.28□□□□□ -0.6
SH2D1AO60880 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 RPL13P2-201ENST00000440687 659 ntBASIC11.28□□□□□ -0.6
SH2D1AO60880 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.28□□□□□ -0.6
SH2D1AO60880 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.28□□□□□ -0.6
SH2D1AO60880 SLC25A1P1-201ENST00000528351 927 ntBASIC11.28□□□□□ -0.6
SH2D1AO60880 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.28□□□□□ -0.6
SH2D1AO60880 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.28□□□□□ -0.6
SH2D1AO60880 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.28□□□□□ -0.6
SH2D1AO60880 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SH2D1AO60880 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SH2D1AO60880 AL157414.3-201ENST00000624276 1954 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms