Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.9■□□□□ 0.3
SORBS3O60504 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
SORBS3O60504 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SORBS3O60504 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.9■□□□□ 0.3
SORBS3O60504 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.9■□□□□ 0.3
SORBS3O60504 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SORBS3O60504 AKR7A2P1-201ENST00000460134 915 ntBASIC16.9■□□□□ 0.3
SORBS3O60504 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.9■□□□□ 0.3
SORBS3O60504 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.9■□□□□ 0.3
SORBS3O60504 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.9■□□□□ 0.3
SORBS3O60504 AC020914.3-201ENST00000594712 304 ntBASIC16.9■□□□□ 0.3
SORBS3O60504 AL358472.3-201ENST00000608147 415 ntBASIC16.9■□□□□ 0.3
SORBS3O60504 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.9■□□□□ 0.3
SORBS3O60504 AL136301.1-201ENST00000615830 422 ntBASIC16.9■□□□□ 0.3
SORBS3O60504 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SORBS3O60504 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.9■□□□□ 0.3
SORBS3O60504 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.9■□□□□ 0.3
SORBS3O60504 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SORBS3O60504 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.9■□□□□ 0.3
SORBS3O60504 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.9■□□□□ 0.3
SORBS3O60504 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.9■□□□□ 0.3
SORBS3O60504 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.9■□□□□ 0.3
SORBS3O60504 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SORBS3O60504 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SORBS3O60504 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORBS3O60504 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SORBS3O60504 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SORBS3O60504 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SORBS3O60504 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SORBS3O60504 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.89■□□□□ 0.29
SORBS3O60504 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.89■□□□□ 0.29
SORBS3O60504 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 POM121L10P-201ENST00000436994 1285 ntBASIC16.89■□□□□ 0.29
SORBS3O60504 AC004898.1-201ENST00000451057 766 ntBASIC16.89■□□□□ 0.29
SORBS3O60504 AC021723.1-201ENST00000486306 515 ntBASIC16.89■□□□□ 0.29
SORBS3O60504 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.89■□□□□ 0.29
SORBS3O60504 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.89■□□□□ 0.29
SORBS3O60504 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.89■□□□□ 0.29
SORBS3O60504 AC244452.3-201ENST00000636814 210 ntBASIC16.89■□□□□ 0.29
SORBS3O60504 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.89■□□□□ 0.29
SORBS3O60504 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SORBS3O60504 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.89■□□□□ 0.29
SORBS3O60504 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 AC144831.1-201ENST00000573312 2656 ntBASIC16.89■□□□□ 0.29
SORBS3O60504 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORBS3O60504 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.89■□□□□ 0.29
SORBS3O60504 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SORBS3O60504 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORBS3O60504 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms