Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC140479.7-201ENST00000636301 2332 ntBASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BCRP2-202ENST00000447763 634 ntBASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KRT223P-202ENST00000449164 1292 ntBASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CROCCP4-201ENST00000457096 498 ntBASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BCRP6-201ENST00000510112 632 ntBASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BCRP7-201ENST00000511549 544 ntBASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MIR5189-201ENST00000577370 114 ntBASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.15□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.47
TCRBV4S1A1TA0A5B7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms