Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 AC136759.1-202ENST00000530858 2194 ntBASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 AC023090.2-201ENST00000625182 2110 ntBASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 AC006480.2-201ENST00000609770 1337 ntBASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 AL035414.1-201ENST00000451327 857 ntBASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 CICP12-201ENST00000455801 843 ntBASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHB7Q9Y5E2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 AC067930.6-201ENST00000623257 4947 ntBASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 DOC2GP-204ENST00000639052 2548 ntBASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 HYMAI-201ENST00000635591 3347 ntBASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 AC116345.2-201ENST00000512837 523 ntBASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 AC006453.1-201ENST00000636037 1257 ntBASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 AC023024.2-201ENST00000623561 1993 ntBASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PCDHB7Q9Y5E2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms