Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.37□□□□□ -0.43
RCL1Q9Y2P8 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 MIR346-201ENST00000362234 95 ntBASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 AC025181.2-201ENST00000606994 802 ntBASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 Z83851.2-201ENST00000609564 659 ntBASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RCL1Q9Y2P8 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.35□□□□□ -0.43
RCL1Q9Y2P8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms