Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.06
FNDC3AQ9Y2H6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
FNDC3AQ9Y2H6 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
FNDC3AQ9Y2H6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
FNDC3AQ9Y2H6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.46■□□□□ 0.06
FNDC3AQ9Y2H6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
FNDC3AQ9Y2H6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
FNDC3AQ9Y2H6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.46■□□□□ 0.06
FNDC3AQ9Y2H6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 AC093433.1-201ENST00000458048 571 ntBASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 RPL13AP20-201ENST00000459725 609 ntBASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 KRT90P-201ENST00000549264 1064 ntBASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 AP001063.1-201ENST00000568332 529 ntBASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 MIR3615-201ENST00000581999 87 ntBASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.45■□□□□ 0.06
FNDC3AQ9Y2H6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 AC079316.1-201ENST00000548397 411 ntBASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 AC107373.2-201ENST00000607735 490 ntBASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 AC015656.1-201ENST00000624209 3578 ntBASIC15.44■□□□□ 0.06
FNDC3AQ9Y2H6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms