Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 ST20-AS1-201ENST00000560255 4223 ntBASIC12.79□□□□□ -0.36
CLN8Q9UBY8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 BAATP1-201ENST00000412284 1225 ntBASIC12.79□□□□□ -0.36
CLN8Q9UBY8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 U91328.1-201ENST00000437528 223 ntBASIC12.79□□□□□ -0.36
CLN8Q9UBY8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 SLC25A47P1-201ENST00000531577 414 ntBASIC12.79□□□□□ -0.36
CLN8Q9UBY8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 CLUHP6-201ENST00000580789 941 ntBASIC12.79□□□□□ -0.36
CLN8Q9UBY8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 AC013726.1-201ENST00000563747 2285 ntBASIC12.79□□□□□ -0.36
CLN8Q9UBY8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 AC134312.5-201ENST00000568031 1313 ntBASIC12.79□□□□□ -0.36
CLN8Q9UBY8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 AC018665.1-201ENST00000622927 1362 ntBASIC12.79□□□□□ -0.36
CLN8Q9UBY8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 BOLA2P3-201ENST00000404566 256 ntBASIC12.78□□□□□ -0.36
CLN8Q9UBY8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.78□□□□□ -0.36
CLN8Q9UBY8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 AC093433.1-201ENST00000458048 571 ntBASIC12.78□□□□□ -0.36
CLN8Q9UBY8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 AC017083.2-201ENST00000608069 979 ntBASIC12.78□□□□□ -0.36
CLN8Q9UBY8 AP005019.2-201ENST00000615104 511 ntBASIC12.78□□□□□ -0.36
CLN8Q9UBY8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.78□□□□□ -0.36
CLN8Q9UBY8 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CLN8Q9UBY8 LINC00552-201ENST00000625151 2579 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms