Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.28■□□□□ 0.04
HACD3Q9P035 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.27■□□□□ 0.04
HACD3Q9P035 FGD5P1-202ENST00000614866 2498 ntBASIC15.27■□□□□ 0.04
HACD3Q9P035 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.27■□□□□ 0.04
HACD3Q9P035 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HACD3Q9P035 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.27■□□□□ 0.04
HACD3Q9P035 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.27■□□□□ 0.04
HACD3Q9P035 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 ACTBP8-201ENST00000403258 1108 ntBASIC15.27■□□□□ 0.04
HACD3Q9P035 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.27■□□□□ 0.04
HACD3Q9P035 AC093433.1-201ENST00000458048 571 ntBASIC15.27■□□□□ 0.04
HACD3Q9P035 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.27■□□□□ 0.04
HACD3Q9P035 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.27■□□□□ 0.04
HACD3Q9P035 PTP4A1P2-201ENST00000546033 454 ntBASIC15.27■□□□□ 0.04
HACD3Q9P035 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HACD3Q9P035 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.27■□□□□ 0.04
HACD3Q9P035 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HACD3Q9P035 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HACD3Q9P035 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HACD3Q9P035 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.27■□□□□ 0.03
HACD3Q9P035 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HACD3Q9P035 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HACD3Q9P035 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HACD3Q9P035 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
HACD3Q9P035 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HACD3Q9P035 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.27■□□□□ 0.03
HACD3Q9P035 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HACD3Q9P035 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HACD3Q9P035 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HACD3Q9P035 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HACD3Q9P035 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HACD3Q9P035 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HACD3Q9P035 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.26■□□□□ 0.03
HACD3Q9P035 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.26■□□□□ 0.03
HACD3Q9P035 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HACD3Q9P035 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.26■□□□□ 0.03
HACD3Q9P035 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.26■□□□□ 0.03
HACD3Q9P035 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.26■□□□□ 0.03
HACD3Q9P035 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.26■□□□□ 0.03
HACD3Q9P035 AC007389.4-201ENST00000454674 793 ntBASIC15.26■□□□□ 0.03
HACD3Q9P035 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.26■□□□□ 0.03
HACD3Q9P035 DUX4L47-201ENST00000566374 394 ntBASIC15.26■□□□□ 0.03
HACD3Q9P035 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.26■□□□□ 0.03
HACD3Q9P035 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HACD3Q9P035 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HACD3Q9P035 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HACD3Q9P035 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms