Protein–RNA interactions for Protein: Q9NRL3

STRN4, Striatin-4, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4Q9NRL3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
STRN4Q9NRL3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
STRN4Q9NRL3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
STRN4Q9NRL3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
STRN4Q9NRL3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
STRN4Q9NRL3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
STRN4Q9NRL3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 LILRP1-201ENST00000444199 1370 ntBASIC19.62■□□□□ 0.73
STRN4Q9NRL3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 RN7SL396P-201ENST00000471086 295 ntBASIC19.62■□□□□ 0.73
STRN4Q9NRL3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 ETV2-207ENST00000619399 994 ntTSL 5 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 AC105250.1-201ENST00000509378 2057 ntBASIC19.62■□□□□ 0.73
STRN4Q9NRL3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.62■□□□□ 0.73
STRN4Q9NRL3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 HYMAI-201ENST00000635591 3347 ntBASIC19.61■□□□□ 0.73
STRN4Q9NRL3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 TLE1P1-201ENST00000422965 589 ntBASIC19.61■□□□□ 0.73
STRN4Q9NRL3 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 DUX4L50-201ENST00000455245 715 ntBASIC19.61■□□□□ 0.73
STRN4Q9NRL3 AC024293.1-201ENST00000467930 498 ntBASIC19.61■□□□□ 0.73
STRN4Q9NRL3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 AP000911.2-201ENST00000534330 502 ntBASIC19.61■□□□□ 0.73
STRN4Q9NRL3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 AC011247.3-201ENST00000603297 438 ntBASIC19.61■□□□□ 0.73
STRN4Q9NRL3 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 AC148477.9-201ENST00000623974 539 ntBASIC19.61■□□□□ 0.73
STRN4Q9NRL3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 AC023090.2-201ENST00000625182 2110 ntBASIC19.61■□□□□ 0.73
STRN4Q9NRL3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
STRN4Q9NRL3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 AC099398.1-201ENST00000567919 2776 ntBASIC19.6■□□□□ 0.73
STRN4Q9NRL3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 HLA-DMA-203ENST00000395305 777 ntBASIC19.6■□□□□ 0.73
STRN4Q9NRL3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 GCOM2-201ENST00000509133 1104 ntBASIC19.6■□□□□ 0.73
STRN4Q9NRL3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC19.6■□□□□ 0.73
STRN4Q9NRL3 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms