Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RTN4Q9NQC3 UPK3BP1-201ENST00000428678 509 ntBASIC18■□□□□ 0.47
RTN4Q9NQC3 RPS2P1-201ENST00000434010 821 ntBASIC18■□□□□ 0.47
RTN4Q9NQC3 MTCO3P42-201ENST00000509488 518 ntBASIC18■□□□□ 0.47
RTN4Q9NQC3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18■□□□□ 0.47
RTN4Q9NQC3 MTCO3P39-201ENST00000514812 518 ntBASIC18■□□□□ 0.47
RTN4Q9NQC3 OR7E47P-204ENST00000575924 449 ntBASIC18■□□□□ 0.47
RTN4Q9NQC3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18■□□□□ 0.47
RTN4Q9NQC3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTN4Q9NQC3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
RTN4Q9NQC3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18■□□□□ 0.47
RTN4Q9NQC3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC18■□□□□ 0.47
RTN4Q9NQC3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 SP100-206ENST00000409897 2037 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 OR7E14P-202ENST00000530490 1290 ntBASIC17.99■□□□□ 0.47
RTN4Q9NQC3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN4Q9NQC3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 AL354919.1-201ENST00000453837 2257 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 AL160237.2-201ENST00000556165 472 ntBASIC17.98■□□□□ 0.47
RTN4Q9NQC3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 AL136370.1-201ENST00000608166 691 ntBASIC17.98■□□□□ 0.47
RTN4Q9NQC3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms