Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.41□□□□□ -0.26
VRK1Q99986 AC092552.1-201ENST00000547243 906 ntBASIC13.41□□□□□ -0.26
VRK1Q99986 AL359881.2-201ENST00000602973 570 ntBASIC13.41□□□□□ -0.26
VRK1Q99986 AC133539.2-201ENST00000604757 467 ntBASIC13.41□□□□□ -0.26
VRK1Q99986 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VRK1Q99986 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
VRK1Q99986 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.4□□□□□ -0.26
VRK1Q99986 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
VRK1Q99986 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
VRK1Q99986 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.4□□□□□ -0.26
VRK1Q99986 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.4□□□□□ -0.26
VRK1Q99986 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.4□□□□□ -0.26
VRK1Q99986 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 AC007389.4-201ENST00000454674 793 ntBASIC13.4□□□□□ -0.26
VRK1Q99986 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.4□□□□□ -0.26
VRK1Q99986 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.4□□□□□ -0.26
VRK1Q99986 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.4□□□□□ -0.26
VRK1Q99986 HILS1-202ENST00000545329 423 ntBASIC13.4□□□□□ -0.26
VRK1Q99986 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.4□□□□□ -0.26
VRK1Q99986 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.4□□□□□ -0.26
VRK1Q99986 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.4□□□□□ -0.26
VRK1Q99986 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.4□□□□□ -0.26
VRK1Q99986 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.4□□□□□ -0.26
VRK1Q99986 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.4□□□□□ -0.26
VRK1Q99986 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VRK1Q99986 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
VRK1Q99986 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VRK1Q99986 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.4□□□□□ -0.27
VRK1Q99986 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
VRK1Q99986 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
VRK1Q99986 AC005252.3-201ENST00000623855 2258 ntBASIC13.39□□□□□ -0.27
VRK1Q99986 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VRK1Q99986 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
VRK1Q99986 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
VRK1Q99986 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.39□□□□□ -0.27
VRK1Q99986 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
VRK1Q99986 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.39□□□□□ -0.27
VRK1Q99986 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.39□□□□□ -0.27
VRK1Q99986 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.39□□□□□ -0.27
VRK1Q99986 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.39□□□□□ -0.27
VRK1Q99986 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.39□□□□□ -0.27
VRK1Q99986 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.39□□□□□ -0.27
VRK1Q99986 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.39□□□□□ -0.27
VRK1Q99986 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
VRK1Q99986 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.39□□□□□ -0.27
VRK1Q99986 U91328.1-201ENST00000437528 223 ntBASIC13.39□□□□□ -0.27
VRK1Q99986 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.39□□□□□ -0.27
VRK1Q99986 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms