Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 GPS2P2-201ENST00000430745 888 ntBASIC13.42□□□□□ -0.26
RFT1Q96AA3 SPDYE14P-201ENST00000442619 822 ntBASIC13.42□□□□□ -0.26
RFT1Q96AA3 DNAJB3-201ENST00000446806 729 ntBASIC13.42□□□□□ -0.26
RFT1Q96AA3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 RN7SL828P-201ENST00000607615 303 ntBASIC13.42□□□□□ -0.26
RFT1Q96AA3 MIR6080-201ENST00000617359 66 ntBASIC13.42□□□□□ -0.26
RFT1Q96AA3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 AL356585.2-201ENST00000625078 2396 ntBASIC13.42□□□□□ -0.26
RFT1Q96AA3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 HIST3H2BA-201ENST00000436555 524 ntBASIC13.41□□□□□ -0.26
RFT1Q96AA3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 AC026150.2-201ENST00000564693 1156 ntBASIC13.41□□□□□ -0.26
RFT1Q96AA3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 MIR4453-201ENST00000584019 89 ntBASIC13.41□□□□□ -0.26
RFT1Q96AA3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RFT1Q96AA3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RFT1Q96AA3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms