Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AC007292.2-201ENST00000593524 1812 ntBASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 AC018442.1-201ENST00000421439 2061 ntBASIC11.95□□□□□ -0.5
TTC9CQ8N5M4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 DUX4L47-201ENST00000566374 394 ntBASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 AP001063.1-201ENST00000568332 529 ntBASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 TP53TG3HP-202ENST00000569755 579 ntBASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 AC008494.3-201ENST00000606615 944 ntBASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TTC9CQ8N5M4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms