Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
BEST3Q8N1M1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 FAM86HP-204ENST00000513466 959 ntBASIC14.01□□□□□ -0.17
BEST3Q8N1M1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 GPR182-203ENST00000622922 591 ntBASIC14.01□□□□□ -0.17
BEST3Q8N1M1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST3Q8N1M1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
BEST3Q8N1M1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
BEST3Q8N1M1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14□□□□□ -0.17
BEST3Q8N1M1 ZBTB45P1-201ENST00000452761 1456 ntBASIC14□□□□□ -0.17
BEST3Q8N1M1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
BEST3Q8N1M1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 AC020658.6-201ENST00000623564 1870 ntBASIC14□□□□□ -0.17
BEST3Q8N1M1 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 MIR326-201ENST00000362220 95 ntBASIC14□□□□□ -0.17
BEST3Q8N1M1 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14□□□□□ -0.17
BEST3Q8N1M1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 AC245100.3-201ENST00000441281 285 ntBASIC14□□□□□ -0.17
BEST3Q8N1M1 Z93015.1-201ENST00000451718 390 ntBASIC14□□□□□ -0.17
BEST3Q8N1M1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14□□□□□ -0.17
BEST3Q8N1M1 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14□□□□□ -0.17
BEST3Q8N1M1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
BEST3Q8N1M1 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14□□□□□ -0.17
BEST3Q8N1M1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14□□□□□ -0.17
BEST3Q8N1M1 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14□□□□□ -0.17
BEST3Q8N1M1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
BEST3Q8N1M1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms