Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 CICP23-201ENST00000605013 2741 ntBASIC17.8■□□□□ 0.44
SLX4Q8IY92 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 FAM86KP-201ENST00000509817 987 ntBASIC17.79■□□□□ 0.44
SLX4Q8IY92 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 SIGLEC22P-201ENST00000599104 714 ntBASIC17.79■□□□□ 0.44
SLX4Q8IY92 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.79■□□□□ 0.44
SLX4Q8IY92 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 AL672207.1-201ENST00000328462 1570 ntBASIC17.79■□□□□ 0.44
SLX4Q8IY92 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 AC006372.4-201ENST00000624122 1543 ntBASIC17.79■□□□□ 0.44
SLX4Q8IY92 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 CTBP2P8-201ENST00000422584 1330 ntBASIC17.79■□□□□ 0.44
SLX4Q8IY92 TEKT4P2-202ENST00000559466 1312 ntBASIC17.79■□□□□ 0.44
SLX4Q8IY92 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 FAM86B3P-203ENST00000523992 854 ntBASIC17.79■□□□□ 0.44
SLX4Q8IY92 OR5BD1P-201ENST00000532527 817 ntBASIC17.79■□□□□ 0.44
SLX4Q8IY92 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 AP001527.2-201ENST00000614441 631 ntBASIC17.79■□□□□ 0.44
SLX4Q8IY92 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SLX4Q8IY92 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLX4Q8IY92 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 WASH3P-207ENST00000560956 1394 ntBASIC17.78■□□□□ 0.44
SLX4Q8IY92 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 AC093826.1-201ENST00000508655 993 ntBASIC17.78■□□□□ 0.44
SLX4Q8IY92 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.78■□□□□ 0.44
SLX4Q8IY92 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 AGGF1P1-201ENST00000509500 2073 ntBASIC17.78■□□□□ 0.44
SLX4Q8IY92 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLX4Q8IY92 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms