Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 MIR943-201ENST00000401286 94 ntBASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 AC106028.4-201ENST00000614509 607 ntBASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 SPDYE12P-201ENST00000618416 771 ntBASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 AGAP7P-201ENST00000582299 2062 ntBASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 AGAP14-201ENST00000624701 2060 ntBASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM53Q6P2H8 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 TREML5P-201ENST00000421694 576 ntBASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 AL138828.2-201ENST00000615812 383 ntBASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM53Q6P2H8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms