Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 AC105206.1-202ENST00000314927 2368 ntBASIC13.71□□□□□ -0.21
HMGA2P52926 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.71□□□□□ -0.21
HMGA2P52926 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.71□□□□□ -0.21
HMGA2P52926 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 KLF2P3-201ENST00000451977 1087 ntBASIC13.71□□□□□ -0.21
HMGA2P52926 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.71□□□□□ -0.21
HMGA2P52926 AC097493.3-201ENST00000509725 367 ntBASIC13.71□□□□□ -0.21
HMGA2P52926 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HMGA2P52926 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.71□□□□□ -0.21
HMGA2P52926 SRD5A3P1-201ENST00000603021 949 ntBASIC13.71□□□□□ -0.21
HMGA2P52926 AL158211.3-201ENST00000607385 239 ntBASIC13.71□□□□□ -0.21
HMGA2P52926 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.71□□□□□ -0.21
HMGA2P52926 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.71□□□□□ -0.21
HMGA2P52926 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.71□□□□□ -0.21
HMGA2P52926 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HMGA2P52926 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HMGA2P52926 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGA2P52926 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HMGA2P52926 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGA2P52926 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HMGA2P52926 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGA2P52926 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.71□□□□□ -0.22
HMGA2P52926 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGA2P52926 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.71□□□□□ -0.22
HMGA2P52926 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HMGA2P52926 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HMGA2P52926 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HMGA2P52926 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HMGA2P52926 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.7□□□□□ -0.22
HMGA2P52926 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HMGA2P52926 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.7□□□□□ -0.22
HMGA2P52926 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.7□□□□□ -0.22
HMGA2P52926 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.7□□□□□ -0.22
HMGA2P52926 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.7□□□□□ -0.22
HMGA2P52926 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.7□□□□□ -0.22
HMGA2P52926 AC022616.1-201ENST00000518688 554 ntBASIC13.7□□□□□ -0.22
HMGA2P52926 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.7□□□□□ -0.22
HMGA2P52926 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.7□□□□□ -0.22
HMGA2P52926 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.7□□□□□ -0.22
HMGA2P52926 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.7□□□□□ -0.22
HMGA2P52926 AC009407.1-201ENST00000568958 598 ntBASIC13.7□□□□□ -0.22
HMGA2P52926 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.7□□□□□ -0.22
HMGA2P52926 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.7□□□□□ -0.22
HMGA2P52926 BX539320.1-201ENST00000623759 877 ntBASIC13.7□□□□□ -0.22
HMGA2P52926 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.7□□□□□ -0.22
HMGA2P52926 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.7□□□□□ -0.22
HMGA2P52926 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 AC100757.3-201ENST00000622361 1406 ntBASIC13.7□□□□□ -0.22
HMGA2P52926 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms