Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CDC34P49427 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CDC34P49427 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.97□□□□□ -0.49
CDC34P49427 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC34P49427 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CDC34P49427 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CDC34P49427 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 LILRP1-201ENST00000444199 1370 ntBASIC11.96□□□□□ -0.49
CDC34P49427 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.96□□□□□ -0.49
CDC34P49427 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.96□□□□□ -0.49
CDC34P49427 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 AKAP8P1-201ENST00000434743 1349 ntBASIC11.96□□□□□ -0.49
CDC34P49427 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.96□□□□□ -0.49
CDC34P49427 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.96□□□□□ -0.49
CDC34P49427 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.96□□□□□ -0.49
CDC34P49427 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.96□□□□□ -0.49
CDC34P49427 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.96□□□□□ -0.49
CDC34P49427 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.96□□□□□ -0.49
CDC34P49427 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.96□□□□□ -0.49
CDC34P49427 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.96□□□□□ -0.49
CDC34P49427 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.96□□□□□ -0.49
CDC34P49427 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CDC34P49427 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.96□□□□□ -0.49
CDC34P49427 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.96□□□□□ -0.49
CDC34P49427 AC015910.1-201ENST00000579400 975 ntBASIC11.96□□□□□ -0.49
CDC34P49427 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.96□□□□□ -0.49
CDC34P49427 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.96□□□□□ -0.49
CDC34P49427 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
CDC34P49427 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CDC34P49427 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 PCDHA5-203ENST00000614258 4248 ntBASIC11.96□□□□□ -0.49
CDC34P49427 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC34P49427 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CDC34P49427 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.96□□□□□ -0.49
CDC34P49427 FP325330.2-201ENST00000624219 5630 ntBASIC11.96□□□□□ -0.5
CDC34P49427 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
CDC34P49427 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
CDC34P49427 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
CDC34P49427 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC34P49427 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
CDC34P49427 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
CDC34P49427 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC34P49427 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CDC34P49427 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.96□□□□□ -0.5
CDC34P49427 AC099521.3-201ENST00000624251 2938 ntBASIC11.96□□□□□ -0.5
CDC34P49427 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.96□□□□□ -0.5
CDC34P49427 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC34P49427 AC016397.2-201ENST00000624848 1985 ntBASIC11.96□□□□□ -0.5
CDC34P49427 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC34P49427 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CDC34P49427 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CDC34P49427 COL6A4P2-202ENST00000504443 2753 ntBASIC11.96□□□□□ -0.5
CDC34P49427 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC34P49427 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC34P49427 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
CDC34P49427 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
CDC34P49427 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 AC005562.1-201ENST00000583030 3219 ntBASIC11.95□□□□□ -0.5
CDC34P49427 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC34P49427 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC34P49427 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms