Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SSR1P43307 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
SSR1P43307 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR1P43307 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SSR1P43307 AC073869.1-201ENST00000415574 2762 ntBASIC16.12■□□□□ 0.17
SSR1P43307 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR1P43307 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 AC118758.2-201ENST00000614242 2813 ntBASIC16.12■□□□□ 0.17
SSR1P43307 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.12■□□□□ 0.17
SSR1P43307 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR1P43307 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.12■□□□□ 0.17
SSR1P43307 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.12■□□□□ 0.17
SSR1P43307 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR1P43307 AL589987.1-201ENST00000453380 819 ntBASIC16.12■□□□□ 0.17
SSR1P43307 SPDYE18-201ENST00000510091 1050 ntBASIC16.12■□□□□ 0.17
SSR1P43307 AC093214.1-201ENST00000511688 1107 ntBASIC16.12■□□□□ 0.17
SSR1P43307 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR1P43307 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 AC009407.1-201ENST00000568958 598 ntBASIC16.12■□□□□ 0.17
SSR1P43307 AC011467.4-201ENST00000594891 528 ntBASIC16.12■□□□□ 0.17
SSR1P43307 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR1P43307 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR1P43307 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR1P43307 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SSR1P43307 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SSR1P43307 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SSR1P43307 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR1P43307 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR1P43307 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR1P43307 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR1P43307 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SSR1P43307 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SSR1P43307 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR1P43307 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.11■□□□□ 0.17
SSR1P43307 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SSR1P43307 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 AC107918.4-201ENST00000641966 3141 ntBASIC16.11■□□□□ 0.17
SSR1P43307 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SSR1P43307 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR1P43307 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR1P43307 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SSR1P43307 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.11■□□□□ 0.17
SSR1P43307 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR1P43307 ZNF890P-202ENST00000530367 1156 ntBASIC16.11■□□□□ 0.17
SSR1P43307 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR1P43307 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SSR1P43307 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR1P43307 AC008738.7-201ENST00000609744 511 ntBASIC16.11■□□□□ 0.17
SSR1P43307 AL158212.4-201ENST00000624062 1286 ntBASIC16.11■□□□□ 0.17
SSR1P43307 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.11■□□□□ 0.17
SSR1P43307 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.11■□□□□ 0.17
SSR1P43307 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.11■□□□□ 0.17
SSR1P43307 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 AC022144.1-201ENST00000602255 1580 ntBASIC16.11■□□□□ 0.17
SSR1P43307 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SSR1P43307 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.11■□□□□ 0.17
SSR1P43307 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR1P43307 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms