Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SNCAP37840 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.47□□□□□ -0.41
SNCAP37840 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.47□□□□□ -0.41
SNCAP37840 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.47□□□□□ -0.41
SNCAP37840 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.47□□□□□ -0.41
SNCAP37840 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.47□□□□□ -0.41
SNCAP37840 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.47□□□□□ -0.41
SNCAP37840 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.47□□□□□ -0.41
SNCAP37840 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.47□□□□□ -0.41
SNCAP37840 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.47□□□□□ -0.41
SNCAP37840 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SNCAP37840 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SNCAP37840 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.47□□□□□ -0.41
SNCAP37840 AL607033.1-201ENST00000623900 1599 ntBASIC12.47□□□□□ -0.41
SNCAP37840 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.47□□□□□ -0.41
SNCAP37840 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SNCAP37840 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.46□□□□□ -0.41
SNCAP37840 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.46□□□□□ -0.41
SNCAP37840 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SNCAP37840 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.46□□□□□ -0.41
SNCAP37840 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SNCAP37840 FO393414.2-201ENST00000405153 598 ntBASIC12.46□□□□□ -0.41
SNCAP37840 AZGP1P1-201ENST00000411909 902 ntBASIC12.46□□□□□ -0.41
SNCAP37840 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.46□□□□□ -0.41
SNCAP37840 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.46□□□□□ -0.41
SNCAP37840 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.46□□□□□ -0.41
SNCAP37840 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SNCAP37840 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.46□□□□□ -0.41
SNCAP37840 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
SNCAP37840 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.46□□□□□ -0.41
SNCAP37840 AC097359.3-201ENST00000603982 1210 ntBASIC12.46□□□□□ -0.41
SNCAP37840 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.46□□□□□ -0.41
SNCAP37840 AC084121.4-201ENST00000641598 221 ntBASIC12.46□□□□□ -0.41
SNCAP37840 AF228730.8-201ENST00000642140 221 ntBASIC12.46□□□□□ -0.41
SNCAP37840 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNCAP37840 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SNCAP37840 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
SNCAP37840 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.46□□□□□ -0.42
SNCAP37840 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SNCAP37840 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SNCAP37840 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SNCAP37840 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
SNCAP37840 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SNCAP37840 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SNCAP37840 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SNCAP37840 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.46□□□□□ -0.42
SNCAP37840 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SNCAP37840 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SNCAP37840 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
SNCAP37840 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SNCAP37840 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.46□□□□□ -0.42
SNCAP37840 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SNCAP37840 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.45□□□□□ -0.42
SNCAP37840 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms