Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RAB4AP20338 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
RAB4AP20338 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RAB4AP20338 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RAB4AP20338 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RAB4AP20338 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RAB4AP20338 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RAB4AP20338 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
RAB4AP20338 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 AC152010.1-201ENST00000415779 2006 ntBASIC11.62□□□□□ -0.55
RAB4AP20338 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 AC015818.8-201ENST00000587907 1519 ntBASIC11.62□□□□□ -0.55
RAB4AP20338 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
RAB4AP20338 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.62□□□□□ -0.55
RAB4AP20338 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 RCN1P1-201ENST00000400413 996 ntBASIC11.62□□□□□ -0.55
RAB4AP20338 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.62□□□□□ -0.55
RAB4AP20338 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.62□□□□□ -0.55
RAB4AP20338 KRT16P4-201ENST00000453883 522 ntBASIC11.62□□□□□ -0.55
RAB4AP20338 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.62□□□□□ -0.55
RAB4AP20338 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.62□□□□□ -0.55
RAB4AP20338 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.62□□□□□ -0.55
RAB4AP20338 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 AC012615.1-201ENST00000565797 1299 ntBASIC11.62□□□□□ -0.55
RAB4AP20338 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
RAB4AP20338 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
RAB4AP20338 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
RAB4AP20338 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
RAB4AP20338 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
RAB4AP20338 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
RAB4AP20338 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.62□□□□□ -0.55
RAB4AP20338 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.62□□□□□ -0.55
RAB4AP20338 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 AC006504.4-201ENST00000592118 1568 ntBASIC11.62□□□□□ -0.55
RAB4AP20338 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
RAB4AP20338 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.62□□□□□ -0.55
RAB4AP20338 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB4AP20338 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB4AP20338 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB4AP20338 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB4AP20338 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB4AP20338 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB4AP20338 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB4AP20338 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC11.61□□□□□ -0.55
RAB4AP20338 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
RAB4AP20338 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.61□□□□□ -0.55
RAB4AP20338 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
RAB4AP20338 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB4AP20338 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB4AP20338 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB4AP20338 DUX4L26-201ENST00000489078 1255 ntBASIC11.61□□□□□ -0.55
RAB4AP20338 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.61□□□□□ -0.55
RAB4AP20338 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.61□□□□□ -0.55
RAB4AP20338 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms