Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AL355385.1-201ENST00000606123 409 ntBASIC15.82■□□□□ 0.12
RARAP10276 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.82■□□□□ 0.12
RARAP10276 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RARAP10276 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.82■□□□□ 0.12
RARAP10276 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.82■□□□□ 0.12
RARAP10276 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.82■□□□□ 0.12
RARAP10276 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RARAP10276 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RARAP10276 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 FLJ16779-201ENST00000612722 7638 ntBASIC15.81■□□□□ 0.12
RARAP10276 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RARAP10276 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RARAP10276 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.81■□□□□ 0.12
RARAP10276 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.81■□□□□ 0.12
RARAP10276 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RARAP10276 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
RARAP10276 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.81■□□□□ 0.12
RARAP10276 ELK1P1-201ENST00000485699 580 ntBASIC15.81■□□□□ 0.12
RARAP10276 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.81■□□□□ 0.12
RARAP10276 AP001582.1-201ENST00000525856 295 ntBASIC15.81■□□□□ 0.12
RARAP10276 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.81■□□□□ 0.12
RARAP10276 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RARAP10276 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.81■□□□□ 0.12
RARAP10276 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.81■□□□□ 0.12
RARAP10276 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.81■□□□□ 0.12
RARAP10276 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.81■□□□□ 0.12
RARAP10276 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.81■□□□□ 0.12
RARAP10276 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.81■□□□□ 0.12
RARAP10276 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.81■□□□□ 0.12
RARAP10276 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RARAP10276 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.81■□□□□ 0.12
RARAP10276 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RARAP10276 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.8■□□□□ 0.12
RARAP10276 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RARAP10276 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RARAP10276 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.8■□□□□ 0.12
RARAP10276 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.8■□□□□ 0.12
RARAP10276 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RARAP10276 AL139094.1-201ENST00000405549 1188 ntBASIC15.8■□□□□ 0.12
RARAP10276 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.8■□□□□ 0.12
RARAP10276 SOCS2P1-201ENST00000417727 557 ntBASIC15.8■□□□□ 0.12
RARAP10276 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.8■□□□□ 0.12
RARAP10276 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.8■□□□□ 0.12
RARAP10276 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.8■□□□□ 0.12
RARAP10276 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.8■□□□□ 0.12
RARAP10276 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.8■□□□□ 0.12
RARAP10276 MIR4745-201ENST00000577608 62 ntBASIC15.8■□□□□ 0.12
RARAP10276 CTBP2P3-201ENST00000585629 1255 ntBASIC15.8■□□□□ 0.12
RARAP10276 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 AC008494.3-201ENST00000606615 944 ntBASIC15.8■□□□□ 0.12
RARAP10276 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms