Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TCRAP04437 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.5□□□□□ -0.57
TCRAP04437 PEG13-201ENST00000631594 5667 ntBASIC11.5□□□□□ -0.57
TCRAP04437 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.5□□□□□ -0.57
TCRAP04437 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.5□□□□□ -0.57
TCRAP04437 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.5□□□□□ -0.57
TCRAP04437 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.5□□□□□ -0.57
TCRAP04437 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
TCRAP04437 AC005237.2-201ENST00000434368 219 ntBASIC11.5□□□□□ -0.57
TCRAP04437 RPL13P2-201ENST00000440687 659 ntBASIC11.5□□□□□ -0.57
TCRAP04437 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
TCRAP04437 SERBP1P3-201ENST00000459980 809 ntBASIC11.5□□□□□ -0.57
TCRAP04437 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.5□□□□□ -0.57
TCRAP04437 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC11.5□□□□□ -0.57
TCRAP04437 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.5□□□□□ -0.57
TCRAP04437 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.5□□□□□ -0.57
TCRAP04437 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.5□□□□□ -0.57
TCRAP04437 AL079307.3-201ENST00000556114 283 ntBASIC11.5□□□□□ -0.57
TCRAP04437 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.5□□□□□ -0.57
TCRAP04437 AC025048.3-201ENST00000590609 569 ntBASIC11.5□□□□□ -0.57
TCRAP04437 AC005702.4-201ENST00000618393 416 ntBASIC11.5□□□□□ -0.57
TCRAP04437 LINC00628-201ENST00000628516 1289 ntBASIC11.5□□□□□ -0.57
TCRAP04437 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TCRAP04437 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TCRAP04437 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.5□□□□□ -0.57
TCRAP04437 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.5□□□□□ -0.57
TCRAP04437 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
TCRAP04437 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.5□□□□□ -0.57
TCRAP04437 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.5□□□□□ -0.57
TCRAP04437 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.5□□□□□ -0.57
TCRAP04437 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TCRAP04437 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
TCRAP04437 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 C8orf49-201ENST00000525043 1968 ntBASIC11.49□□□□□ -0.57
TCRAP04437 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.49□□□□□ -0.57
TCRAP04437 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
TCRAP04437 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 TOMM22P5-201ENST00000416399 439 ntBASIC11.49□□□□□ -0.57
TCRAP04437 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 MCCD1P2-201ENST00000423228 335 ntBASIC11.49□□□□□ -0.57
TCRAP04437 KRT18P32-201ENST00000424695 1287 ntBASIC11.49□□□□□ -0.57
TCRAP04437 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.49□□□□□ -0.57
TCRAP04437 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.49□□□□□ -0.57
TCRAP04437 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TCRAP04437 AF228730.6-201ENST00000641497 218 ntBASIC11.49□□□□□ -0.57
TCRAP04437 AC084121.3-201ENST00000641716 218 ntBASIC11.49□□□□□ -0.57
TCRAP04437 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
TCRAP04437 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.49□□□□□ -0.57
TCRAP04437 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TCRAP04437 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms