Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.51□□□□□ -0.25
CDRT1O95170 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CDRT1O95170 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CDRT1O95170 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.5□□□□□ -0.25
CDRT1O95170 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.5□□□□□ -0.25
CDRT1O95170 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CDRT1O95170 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CDRT1O95170 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CDRT1O95170 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CDRT1O95170 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 MIR940-201ENST00000401276 94 ntBASIC13.5□□□□□ -0.25
CDRT1O95170 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.5□□□□□ -0.25
CDRT1O95170 FDX1P1-201ENST00000449115 551 ntBASIC13.5□□□□□ -0.25
CDRT1O95170 TIMM8BP1-201ENST00000452384 211 ntBASIC13.5□□□□□ -0.25
CDRT1O95170 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.5□□□□□ -0.25
CDRT1O95170 AC022447.6-201ENST00000515522 438 ntBASIC13.5□□□□□ -0.25
CDRT1O95170 LINC01225-203ENST00000563550 1244 ntBASIC13.5□□□□□ -0.25
CDRT1O95170 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.5□□□□□ -0.25
CDRT1O95170 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.5□□□□□ -0.25
CDRT1O95170 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.5□□□□□ -0.25
CDRT1O95170 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CDRT1O95170 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.5□□□□□ -0.25
CDRT1O95170 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.5□□□□□ -0.25
CDRT1O95170 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CDRT1O95170 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.5□□□□□ -0.25
CDRT1O95170 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.5□□□□□ -0.25
CDRT1O95170 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDRT1O95170 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CDRT1O95170 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.49□□□□□ -0.25
CDRT1O95170 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CDRT1O95170 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.49□□□□□ -0.25
CDRT1O95170 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CDRT1O95170 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 UXT-AS1-201ENST00000590504 1525 ntBASIC13.49□□□□□ -0.25
CDRT1O95170 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.49□□□□□ -0.25
CDRT1O95170 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDRT1O95170 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CDRT1O95170 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDRT1O95170 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
CDRT1O95170 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.49□□□□□ -0.25
CDRT1O95170 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.49□□□□□ -0.25
CDRT1O95170 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.49□□□□□ -0.25
CDRT1O95170 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.49□□□□□ -0.25
CDRT1O95170 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.49□□□□□ -0.25
CDRT1O95170 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.49□□□□□ -0.25
CDRT1O95170 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.49□□□□□ -0.25
CDRT1O95170 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.49□□□□□ -0.25
CDRT1O95170 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
CDRT1O95170 AC026979.3-201ENST00000607315 403 ntBASIC13.49□□□□□ -0.25
CDRT1O95170 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.49□□□□□ -0.25
CDRT1O95170 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.49□□□□□ -0.25
CDRT1O95170 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.49□□□□□ -0.25
CDRT1O95170 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDRT1O95170 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CDRT1O95170 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 KRT8P24-201ENST00000560290 1559 ntBASIC13.49□□□□□ -0.25
CDRT1O95170 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDRT1O95170 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CDRT1O95170 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDRT1O95170 Z82170.1-201ENST00000625081 3192 ntBASIC13.48□□□□□ -0.25
CDRT1O95170 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.48□□□□□ -0.25
CDRT1O95170 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDRT1O95170 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDRT1O95170 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms