Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
KDM4BO94953 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.34□□□□□ -0.27
KDM4BO94953 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.33□□□□□ -0.27
KDM4BO94953 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
KDM4BO94953 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.33□□□□□ -0.27
KDM4BO94953 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
KDM4BO94953 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.33□□□□□ -0.27
KDM4BO94953 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.33□□□□□ -0.27
KDM4BO94953 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
KDM4BO94953 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.33□□□□□ -0.27
KDM4BO94953 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
KDM4BO94953 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
KDM4BO94953 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.33□□□□□ -0.28
KDM4BO94953 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
KDM4BO94953 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
KDM4BO94953 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 SPDYE7P-202ENST00000420373 878 ntBASIC13.33□□□□□ -0.28
KDM4BO94953 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.33□□□□□ -0.28
KDM4BO94953 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
KDM4BO94953 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.33□□□□□ -0.28
KDM4BO94953 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 AP001059.3-201ENST00000619053 235 ntBASIC13.33□□□□□ -0.28
KDM4BO94953 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.33□□□□□ -0.28
KDM4BO94953 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.33□□□□□ -0.28
KDM4BO94953 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.33□□□□□ -0.28
KDM4BO94953 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
KDM4BO94953 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
KDM4BO94953 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.33□□□□□ -0.28
KDM4BO94953 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.33□□□□□ -0.28
KDM4BO94953 HSPA7-201ENST00000445535 1927 ntBASIC13.33□□□□□ -0.28
KDM4BO94953 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KDM4BO94953 AC099521.3-201ENST00000624251 2938 ntBASIC13.33□□□□□ -0.28
KDM4BO94953 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.32□□□□□ -0.28
KDM4BO94953 AC136759.1-202ENST00000530858 2194 ntBASIC13.32□□□□□ -0.28
KDM4BO94953 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.32□□□□□ -0.28
KDM4BO94953 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.32□□□□□ -0.28
KDM4BO94953 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.32□□□□□ -0.28
KDM4BO94953 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
KDM4BO94953 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.32□□□□□ -0.28
KDM4BO94953 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KDM4BO94953 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms