Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNND1O60716 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNND1O60716 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.47■□□□□ 0.39
CTNND1O60716 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.47■□□□□ 0.39
CTNND1O60716 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNND1O60716 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.47■□□□□ 0.39
CTNND1O60716 AC242376.1-201ENST00000559033 726 ntBASIC17.47■□□□□ 0.39
CTNND1O60716 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.47■□□□□ 0.39
CTNND1O60716 MIR6720-201ENST00000611664 98 ntBASIC17.47■□□□□ 0.39
CTNND1O60716 MIR6727-201ENST00000620702 65 ntBASIC17.47■□□□□ 0.39
CTNND1O60716 AC006453.1-201ENST00000636037 1257 ntBASIC17.47■□□□□ 0.39
CTNND1O60716 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CTNND1O60716 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.47■□□□□ 0.39
CTNND1O60716 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.47■□□□□ 0.39
CTNND1O60716 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CTNND1O60716 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNND1O60716 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNND1O60716 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTNND1O60716 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTNND1O60716 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNND1O60716 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNND1O60716 AC020658.6-201ENST00000623564 1870 ntBASIC17.46■□□□□ 0.39
CTNND1O60716 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNND1O60716 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNND1O60716 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNND1O60716 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNND1O60716 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CTNND1O60716 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNND1O60716 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTNND1O60716 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.46■□□□□ 0.39
CTNND1O60716 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNND1O60716 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.46■□□□□ 0.39
CTNND1O60716 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNND1O60716 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.46■□□□□ 0.39
CTNND1O60716 RTN3P1-201ENST00000536295 711 ntBASIC17.46■□□□□ 0.39
CTNND1O60716 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
CTNND1O60716 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNND1O60716 AC023824.1-201ENST00000562945 2975 ntBASIC17.46■□□□□ 0.39
CTNND1O60716 AP000845.1-201ENST00000581677 2131 ntBASIC17.46■□□□□ 0.39
CTNND1O60716 AC012044.1-201ENST00000603431 297 ntBASIC17.46■□□□□ 0.39
CTNND1O60716 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNND1O60716 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNND1O60716 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNND1O60716 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CTNND1O60716 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNND1O60716 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNND1O60716 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNND1O60716 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNND1O60716 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CTNND1O60716 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CTNND1O60716 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CTNND1O60716 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.46■□□□□ 0.38
CTNND1O60716 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CTNND1O60716 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.45■□□□□ 0.38
CTNND1O60716 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CTNND1O60716 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.45■□□□□ 0.38
CTNND1O60716 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTNND1O60716 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.45■□□□□ 0.38
CTNND1O60716 CEP164P1-201ENST00000455142 418 ntBASIC17.45■□□□□ 0.38
CTNND1O60716 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.45■□□□□ 0.38
CTNND1O60716 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.45■□□□□ 0.38
CTNND1O60716 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.45■□□□□ 0.38
CTNND1O60716 AC116345.2-201ENST00000512837 523 ntBASIC17.45■□□□□ 0.38
CTNND1O60716 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTNND1O60716 AC005962.1-201ENST00000584100 773 ntBASIC17.45■□□□□ 0.38
CTNND1O60716 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.45■□□□□ 0.38
CTNND1O60716 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.45■□□□□ 0.38
CTNND1O60716 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.45■□□□□ 0.38
CTNND1O60716 AC027601.3-201ENST00000622907 509 ntBASIC17.45■□□□□ 0.38
CTNND1O60716 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTNND1O60716 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.45■□□□□ 0.38
CTNND1O60716 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.45■□□□□ 0.38
CTNND1O60716 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNND1O60716 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms