Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 AC108725.1-201ENST00000495472 409 ntBASIC15.66■□□□□ 0.1
SRRM3A6NNA2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 ZNF890P-202ENST00000530367 1156 ntBASIC15.66■□□□□ 0.1
SRRM3A6NNA2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 AC015909.5-201ENST00000624336 2266 ntBASIC15.66■□□□□ 0.1
SRRM3A6NNA2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRRM3A6NNA2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 AC055811.4-201ENST00000624039 1754 ntBASIC15.65■□□□□ 0.1
SRRM3A6NNA2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 ELK1P1-201ENST00000485699 580 ntBASIC15.65■□□□□ 0.1
SRRM3A6NNA2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 AC023090.2-201ENST00000625182 2110 ntBASIC15.65■□□□□ 0.1
SRRM3A6NNA2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM3A6NNA2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms