Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 LILRP1-201ENST00000444199 1370 ntBASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 FAM58CP-201ENST00000435741 640 ntBASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 AC079140.1-201ENST00000508039 487 ntBASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 AC022447.6-201ENST00000515522 438 ntBASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 RARRES2P9-201ENST00000565168 469 ntBASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 AC015910.1-201ENST00000579400 975 ntBASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 AC025181.2-201ENST00000606994 802 ntBASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 PPT1-213ENST00000641319 2388 ntBASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 KRT18P64-201ENST00000434946 1219 ntBASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 TIMM8BP1-201ENST00000452384 211 ntBASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 FAM86C2P-203ENST00000528684 1004 ntBASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 LINC01225-203ENST00000563550 1244 ntBASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MEIS3P1A6NDR6 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms