Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GHSR-202ENST00000427970 912 ntBASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ACTG1P3-201ENST00000431775 1114 ntBASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AP005482.1-201ENST00000563722 1273 ntBASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC120045.2-201ENST00000567334 178 ntBASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RPS2P32-201ENST00000439199 892 ntBASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL355864.2-201ENST00000447420 863 ntBASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC104989.1-201ENST00000519711 778 ntBASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC009486.1-201ENST00000569860 813 ntBASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms