Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 RAC2-204ENST00000406508 893 ntTSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 TSPY16P-201ENST00000449843 468 ntBASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 RRP7BP-205ENST00000566851 833 ntBASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 AC004790.1-201ENST00000612686 536 ntBASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 AJ011932.1-201ENST00000621707 465 ntBASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 AC007787.1-201ENST00000588095 1583 ntBASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
TRGV1A0A0A0MS02 AC099063.4-201ENST00000641099 1602 ntBASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms