Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 TUBB3P1-201ENST00000405796 1332 ntBASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 AL137783.1-201ENST00000623494 1896 ntBASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 AC211486.1-202ENST00000416371 468 ntBASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 COX10-202ENST00000429152 875 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 AC211476.1-201ENST00000503899 468 ntBASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 SPDYE12P-201ENST00000618416 771 ntBASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 AC023090.2-201ENST00000625182 2110 ntBASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE2Q9NRR3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE2Q9NRR3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms