Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 AC138969.3-201ENST00000546612 1459 ntBASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 AC138932.2-201ENST00000548268 1459 ntBASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 AC126755.4-201ENST00000549796 1459 ntBASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SND1-IT1Q9HBX3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 OR2I1P-208ENST00000641137 4948 ntBASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 AC005562.1-201ENST00000583030 3219 ntBASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 AZGP1P1-201ENST00000411909 902 ntBASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 TFAMP1-201ENST00000412727 736 ntBASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 AL671277.1-201ENST00000429656 993 ntBASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 AC007967.2-201ENST00000432613 625 ntBASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 KRT18P2-201ENST00000447938 1258 ntBASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 RN7SL510P-201ENST00000581311 263 ntBASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SND1-IT1Q9HBX3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms