Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AMBRA1Q9C0C7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 AC023090.2-201ENST00000625182 2110 ntBASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 BASP1P1-201ENST00000430708 665 ntBASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 AL512361.1-201ENST00000554200 418 ntBASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AMBRA1Q9C0C7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
AMBRA1Q9C0C7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
AMBRA1Q9C0C7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.15□□□□□ -0.15
AMBRA1Q9C0C7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 AC099521.3-201ENST00000624251 2938 ntBASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 GK-202ENST00000378941 458 ntTSL 3 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 AC241585.1-201ENST00000433527 519 ntBASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms