Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 RBPMS2P1-201ENST00000437762 623 ntBASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 AC093520.2-201ENST00000561830 333 ntBASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 AC040169.1-201ENST00000565382 521 ntBASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 AC092364.2-202ENST00000597012 1073 ntBASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 AL590627.1-203ENST00000421194 1026 ntBASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 MIR4453-201ENST00000584019 89 ntBASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 MIR6074-201ENST00000612054 107 ntBASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 AC004461.2-201ENST00000629517 803 ntBASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 AL513210.1-201ENST00000629608 234 ntBASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GABARAPL3Q9BY60 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.68□□□□□ -0.22
GABARAPL3Q9BY60 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms