Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 CHCHD2P3-201ENST00000603038 451 ntBASIC14.31□□□□□ -0.12
COL21A1Q96P44 AC007431.3-201ENST00000623221 587 ntBASIC14.31□□□□□ -0.12
COL21A1Q96P44 AL645728.2-202ENST00000641679 227 ntBASIC14.31□□□□□ -0.12
COL21A1Q96P44 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 AC006504.5-208ENST00000588784 2401 ntBASIC14.3□□□□□ -0.12
COL21A1Q96P44 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 AC027307.3-201ENST00000594262 1100 ntBASIC14.3□□□□□ -0.12
COL21A1Q96P44 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 AL662799.1-202ENST00000614205 422 ntBASIC14.3□□□□□ -0.12
COL21A1Q96P44 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.3□□□□□ -0.12
COL21A1Q96P44 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.3□□□□□ -0.12
COL21A1Q96P44 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
COL21A1Q96P44 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL21A1Q96P44 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 AC117489.1-201ENST00000625169 3217 ntBASIC14.29□□□□□ -0.12
COL21A1Q96P44 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 TP53TG3HP-202ENST00000569755 579 ntBASIC14.29□□□□□ -0.12
COL21A1Q96P44 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 AL049840.4-201ENST00000602422 811 ntBASIC14.29□□□□□ -0.12
COL21A1Q96P44 AC008494.3-201ENST00000606615 944 ntBASIC14.29□□□□□ -0.12
COL21A1Q96P44 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 MIR8072-201ENST00000614241 80 ntBASIC14.29□□□□□ -0.12
COL21A1Q96P44 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL21A1Q96P44 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
COL21A1Q96P44 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms