Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AC092171.5-201ENST00000608012 942 ntBASIC18.38■□□□□ 0.53
RPGRQ92834 BX088702.1-201ENST00000610784 235 ntBASIC18.38■□□□□ 0.53
RPGRQ92834 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 FRMPD2B-201ENST00000431305 1347 ntBASIC18.38■□□□□ 0.53
RPGRQ92834 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RPGRQ92834 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.38■□□□□ 0.53
RPGRQ92834 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RPGRQ92834 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.38■□□□□ 0.53
RPGRQ92834 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RPGRQ92834 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RPGRQ92834 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 PCDHB19P-201ENST00000570871 2371 ntBASIC18.38■□□□□ 0.53
RPGRQ92834 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RPGRQ92834 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.37■□□□□ 0.53
RPGRQ92834 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RPGRQ92834 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.37■□□□□ 0.53
RPGRQ92834 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 AC026320.2-201ENST00000434379 478 ntBASIC18.37■□□□□ 0.53
RPGRQ92834 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.37■□□□□ 0.53
RPGRQ92834 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.37■□□□□ 0.53
RPGRQ92834 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.37■□□□□ 0.53
RPGRQ92834 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.37■□□□□ 0.53
RPGRQ92834 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.37■□□□□ 0.53
RPGRQ92834 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.37■□□□□ 0.53
RPGRQ92834 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.37■□□□□ 0.53
RPGRQ92834 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.37■□□□□ 0.53
RPGRQ92834 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.37■□□□□ 0.53
RPGRQ92834 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RPGRQ92834 AC074138.1-201ENST00000611182 1303 ntBASIC18.37■□□□□ 0.53
RPGRQ92834 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.37■□□□□ 0.53
RPGRQ92834 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RPGRQ92834 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.37■□□□□ 0.53
RPGRQ92834 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.37■□□□□ 0.53
RPGRQ92834 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 AC023090.2-201ENST00000625182 2110 ntBASIC18.37■□□□□ 0.53
RPGRQ92834 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.37■□□□□ 0.53
RPGRQ92834 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPGRQ92834 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.36■□□□□ 0.53
RPGRQ92834 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPGRQ92834 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPGRQ92834 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPGRQ92834 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPGRQ92834 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPGRQ92834 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.36■□□□□ 0.53
RPGRQ92834 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.36■□□□□ 0.53
RPGRQ92834 AP000356.3-201ENST00000382243 753 ntBASIC18.36■□□□□ 0.53
RPGRQ92834 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.36■□□□□ 0.53
RPGRQ92834 RPSAP31-201ENST00000416648 895 ntBASIC18.36■□□□□ 0.53
RPGRQ92834 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RPGRQ92834 AL645933.1-201ENST00000440087 609 ntBASIC18.36■□□□□ 0.53
RPGRQ92834 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RPGRQ92834 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.36■□□□□ 0.53
RPGRQ92834 ZBED1P1-201ENST00000502364 1930 ntBASIC18.36■□□□□ 0.53
RPGRQ92834 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RPGRQ92834 AC135983.4-201ENST00000564116 1262 ntBASIC18.36■□□□□ 0.53
RPGRQ92834 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.36■□□□□ 0.53
RPGRQ92834 AP000845.1-201ENST00000581677 2131 ntBASIC18.36■□□□□ 0.53
RPGRQ92834 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPGRQ92834 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.36■□□□□ 0.53
RPGRQ92834 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.36■□□□□ 0.53
RPGRQ92834 MIR6769A-201ENST00000617340 73 ntBASIC18.36■□□□□ 0.53
RPGRQ92834 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.36■□□□□ 0.53
RPGRQ92834 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.35■□□□□ 0.53
RPGRQ92834 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.35■□□□□ 0.53
RPGRQ92834 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPGRQ92834 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms