Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 AL355334.1-201ENST00000417713 215 ntBASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 AC092171.5-201ENST00000608012 942 ntBASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 AC006058.4-201ENST00000624016 1670 ntBASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMFBP1Q8TBY8 AL138725.1-201ENST00000407347 1314 ntBASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 FER1L4-210ENST00000615531 5998 ntBASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 AL627231.1-201ENST00000394467 1125 ntBASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 FAM58BP-201ENST00000439056 645 ntBASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 AC012441.2-201ENST00000444843 739 ntBASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 COX6A1P2-201ENST00000620597 330 ntBASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMFBP1Q8TBY8 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 AC092384.3-202ENST00000564646 2873 ntBASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMFBP1Q8TBY8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms