Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 HSPA7-201ENST00000445535 1927 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 SLC7A15P-201ENST00000424028 1363 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 RNU1-114P-201ENST00000365297 166 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 AC134915.1-201ENST00000426461 574 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 AC092183.1-201ENST00000469884 875 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 RPL13AP25-201ENST00000484130 612 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 AP001582.1-201ENST00000525856 295 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 AC055876.2-201ENST00000531834 546 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 RRP7BP-205ENST00000566851 833 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 AC007431.3-201ENST00000623221 587 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 GRK6P1-201ENST00000400595 1711 ntBASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC83Q8IWF9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 AC005840.4-201ENST00000541242 2494 ntBASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 C1QBPP1-201ENST00000400117 770 ntBASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 AC098850.1-201ENST00000419919 790 ntBASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 MEP1AP4-201ENST00000423244 1087 ntBASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 PMS2P2-201ENST00000425039 1128 ntBASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 PRSS30P-206ENST00000641773 873 ntBASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC83Q8IWF9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms