Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 AC126365.1-201ENST00000578585 1514 ntBASIC9.02□□□□□ -0.96
VPS13BQ7Z7G8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 ZBED1P1-201ENST00000502364 1930 ntBASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 CSNK1G2P1-201ENST00000442675 955 ntBASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 AL627230.2-201ENST00000613254 655 ntBASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 ACE3P-201ENST00000423435 1973 ntBASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 AC013268.4-201ENST00000637413 2228 ntBASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS13BQ7Z7G8 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 RPSAP15-201ENST00000448168 861 ntBASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 OR2R1P-201ENST00000441404 914 ntBASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 KRT8P28-201ENST00000433288 1390 ntBASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms