Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.27■□□□□ 0.36
OTOP1Q7RTM1 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.27■□□□□ 0.36
OTOP1Q7RTM1 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
OTOP1Q7RTM1 AC007881.3-201ENST00000608897 607 ntBASIC17.27■□□□□ 0.36
OTOP1Q7RTM1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.27■□□□□ 0.36
OTOP1Q7RTM1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
OTOP1Q7RTM1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
OTOP1Q7RTM1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
OTOP1Q7RTM1 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 AC073347.1-201ENST00000421633 2643 ntBASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.27■□□□□ 0.35
OTOP1Q7RTM1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 MESTP3-201ENST00000503460 968 ntBASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 AL132780.4-201ENST00000624870 1135 ntBASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 CAP2P1-201ENST00000557743 1390 ntBASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 AC023024.2-201ENST00000623561 1993 ntBASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
OTOP1Q7RTM1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 RN7SL258P-201ENST00000478664 300 ntBASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 HLA-J-204ENST00000495278 958 ntBASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 AL603764.1-201ENST00000636452 321 ntBASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.25■□□□□ 0.35
OTOP1Q7RTM1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms