Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 FAM86LP-201ENST00000478302 853 ntBASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 DOC2GP-202ENST00000514950 1163 ntBASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 RNA5SP421-201ENST00000516864 134 ntBASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 AC006538.3-201ENST00000612495 578 ntBASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 CLK3P2-201ENST00000427566 1453 ntBASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 AC004840.1-201ENST00000636359 365 ntBASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST3H2AQ7L7L0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms