Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEP78395 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEP78395 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEP78395 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEP78395 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PRAMEP78395 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 CICP14-201ENST00000629111 2732 ntBASIC15.27■□□□□ 0.04
PRAMEP78395 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEP78395 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
PRAMEP78395 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 C1QBPP1-201ENST00000400117 770 ntBASIC15.27■□□□□ 0.04
PRAMEP78395 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEP78395 NUS1P3-201ENST00000423502 862 ntBASIC15.27■□□□□ 0.04
PRAMEP78395 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEP78395 AL442647.2-201ENST00000429864 857 ntBASIC15.27■□□□□ 0.04
PRAMEP78395 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEP78395 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PRAMEP78395 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEP78395 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEP78395 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEP78395 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEP78395 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.27■□□□□ 0.04
PRAMEP78395 MIR8072-201ENST00000614241 80 ntBASIC15.27■□□□□ 0.04
PRAMEP78395 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEP78395 BX539320.1-201ENST00000623759 877 ntBASIC15.27■□□□□ 0.04
PRAMEP78395 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEP78395 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEP78395 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEP78395 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEP78395 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.27■□□□□ 0.03
PRAMEP78395 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEP78395 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEP78395 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.27■□□□□ 0.03
PRAMEP78395 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEP78395 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEP78395 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.27■□□□□ 0.03
PRAMEP78395 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PRAMEP78395 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEP78395 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 REXO1L5P-201ENST00000622260 2098 ntBASIC15.26■□□□□ 0.03
PRAMEP78395 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.26■□□□□ 0.03
PRAMEP78395 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEP78395 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEP78395 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEP78395 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEP78395 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEP78395 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEP78395 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PRAMEP78395 SOCS2P1-201ENST00000417727 557 ntBASIC15.26■□□□□ 0.03
PRAMEP78395 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEP78395 BCRP1-201ENST00000444246 691 ntBASIC15.26■□□□□ 0.03
PRAMEP78395 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
PRAMEP78395 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEP78395 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEP78395 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEP78395 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEP78395 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEP78395 LINC02560-201ENST00000596379 459 ntBASIC15.26■□□□□ 0.03
PRAMEP78395 AL096865.1-201ENST00000606796 927 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms