Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.99□□□□□ -0.33
AP3S2P59780 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
AP3S2P59780 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 RPS2P28-201ENST00000314255 741 ntBASIC12.99□□□□□ -0.33
AP3S2P59780 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
AP3S2P59780 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 AZGP1P1-201ENST00000411909 902 ntBASIC12.99□□□□□ -0.33
AP3S2P59780 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.99□□□□□ -0.33
AP3S2P59780 VN2R19P-201ENST00000442399 1052 ntBASIC12.99□□□□□ -0.33
AP3S2P59780 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.99□□□□□ -0.33
AP3S2P59780 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.99□□□□□ -0.33
AP3S2P59780 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.99□□□□□ -0.33
AP3S2P59780 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.99□□□□□ -0.33
AP3S2P59780 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.99□□□□□ -0.33
AP3S2P59780 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.99□□□□□ -0.33
AP3S2P59780 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
AP3S2P59780 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
AP3S2P59780 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
AP3S2P59780 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.99□□□□□ -0.33
AP3S2P59780 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
AP3S2P59780 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S2P59780 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S2P59780 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S2P59780 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 REXO1L1P-201ENST00000379010 6598 ntBASIC12.98□□□□□ -0.33
AP3S2P59780 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
AP3S2P59780 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
AP3S2P59780 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S2P59780 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 AP002414.3-201ENST00000589352 1468 ntBASIC12.98□□□□□ -0.33
AP3S2P59780 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
AP3S2P59780 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S2P59780 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
AP3S2P59780 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S2P59780 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.98□□□□□ -0.33
AP3S2P59780 TMPOP1-202ENST00000424642 1267 ntBASIC12.98□□□□□ -0.33
AP3S2P59780 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.98□□□□□ -0.33
AP3S2P59780 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.98□□□□□ -0.33
AP3S2P59780 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 AC108751.1-201ENST00000490852 363 ntBASIC12.98□□□□□ -0.33
AP3S2P59780 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.98□□□□□ -0.33
AP3S2P59780 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.98□□□□□ -0.33
AP3S2P59780 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.98□□□□□ -0.33
AP3S2P59780 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.98□□□□□ -0.33
AP3S2P59780 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
AP3S2P59780 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP3S2P59780 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms